MS/MS protein identification software, available for Linux and Windows, Phenyx is scallable in terms of computing nodes and supports many input data formats. Search results can be exported from MS Excel to XML formats
henyx enables proteomics scientists to 1) submit MS/MS data and identify peptides and proteins 2) visualize and evaluate results using various dynamic views, 3) manually validate results and compare Phenyx runs and those of other database search engines (like Mascot, SEQUEST and X!Tandem), 4) perform quantitative analysis with the Phenyx quantitation module, and 5) export results and generate reports into various formats and integrate Phenyx into your laboratory workflow.