Assembles to a reference sequence. Developed with Applied Biosystem's colourspace genomic representation in mind. Authors are Michael Brudno and Stephen Rumble at the University of Toronto. Works with data in letterspace (Roche, Illumina), colourspace (AB) and Helicos space.
SHRiMP2 is a software package for mapping reads from a donor genome against a target (refernce) genome. SHRiMP2 was primarily developed to work with short reads produced by Next Generation Sequencing (NGS) machines
SHRiMP2 is a software package for mapping reads from a donor genome against a target (refernce) genome. SHRiMP2 was primarily developed to work with short reads produced by Next Generation Sequencing (NGS) machines